DBSCR - Regulated genes

   Database of transcriptional regulation in Streptomyces coelicolor
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Regulated gene: rarA

Operons: rarABCDE

Genes Gene ID Synonyms Direction Genome position Function
rarA SGR_1063
- 1251373..1253013 putative sensor-like histidine kinase
rarB SGR_1062
- 1250969..1251376 RarB protein
rarC SGR_1061
- 1250601..1250972 RarC protein
rarD SGR_1060
- 1250006..1250620 putative ATP/GTP-binding protein
rarE SGR_1059
- 1248257..1249834 putative cytochrome P450

Reference: Komatsu M, et al. (2003)
Comments: For the aerial mycelium inducing, only rarA (without rarB-E) is sufficient (Komatsu M, et al. 2003).

Promoters

Binding
factor		 Promoter
name		 Regulation Location Absolute position Binding seq.(cis-element) Experimental evidence
AmfR - Positive ND ND ND Komatsu M, et al. (2003): DB,HM
Unknown_sigma - Promoter -50:+10 1253097..1253156 GTTGGGTGAATATGCCGAAGCACTGTTCTGATCTGGCTAAGCTCACGCGCAGTGAAGTCG Komatsu M, et al. (2003): S1

Terminator

No Data

Overview

DBSCR:

Copyright: BASE, RIKEN
Contact: Yuko Makita