DBSCR - Regulated genes
Database of transcriptional regulation in
Streptomyces coelicolor
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Regulated genes
Revised TLS
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Regulated gene:
dnrO
Operons: dnrO
Genes
Gene ID
Synonyms
Function
dnrO
Operon evidence:
Genome analysis; both upstream and downstream genes are on the opposite strand
Reference:
Promoters
Binding
factor
Promoter
name
Regulation
Location
Binding seq.(cis-element)
Experimental evidence
Organism
Unknown_sigma
dnrO-p1
Promoter
-50:+10
AGACGGCGGGAA
TCGCGG
CCATAGAGTGACCGCGATT
CGTGCC
ACCCTGG
A
AGCATGACC
Otten SL, et al. (2000)
: PE
S. peucetius
Unknown_sigma
dnrO-p2
Promoter
-50:+10
ATCGCGATTAGC
GGATTCC
GTGCAGCAATAGGGTCGGG
GTGGCG
CAGCGAT
C
AGTCCTCGC
Otten SL, et al. (2000)
: PE
S. peucetius
DnrO
-
Negative
-60:+1
GG
CTGGGGAAAAGACGGCGGGAATCGCGGCCATAGAGTG
ACCGCGATTCGTGCCACCCTGG
A
Otten SL, et al. (2000)
: GS
Jiang H, et al. (2006)
: FT
Ajithkumar V, et al. (2010)
: GS
Ajithkumar V, et al. (2010)
: GS, DNR inhibit DnrO binding to promoter.
S. peucetius
Comments:
DnrO
Binding of DnrO to its promoter is inhibited by RHOD (Rhodomycin D) or DNR (daunorubicin).
Terminator
No Data
DBSCR:
Copyright: BASE, RIKEN
Contact:
Yuko Makita