DBSCR - Regulated genes

   Database of transcriptional regulation in Streptomyces coelicolor
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Regulated gene: sigH

Operons: ushYX-sigH

Genes Gene ID Synonyms Direction Genome position Function
ushY SCO5245 2SC7G11.07c, ushY - 5705753..5706013 conserved hypothetical protein
ushX SCO5244 2SC7G11.06c, prs, prsH, ushX - 5705089..5705502 anti-sigma factor
sigH SCO5243 2SC7G11.05c, sig1, sig37, sig52, sigH - 5704007..5705092 RNA polymerase sigma factor

Operon evidence: transcriptional analylsis
Reference: Kormanec J, et al. (2000)

Promoters

Binding
factor		 Promoter
name		 Regulation Location Absolute position Binding seq.(cis-element) Experimental evidence
SigB sigH-p2 Promoter -50:+10 5705695..5705754 GACCTGTGCCCGGGACGGTTCGACCGTCTGACGTCTGGGTACGTCAACCCGGCGCGCGCT Lee EJ, et al. (2005): AR, DB
BldD sigH-p3 Negative -40:+15 5705620..5705674 ACCCCCTAGCCACTGTGCGTGTTCGCGTGTTTACTATGAGTGACAGCACGGGGTT Kelemen GH, et al. (2001): S1, DB, FT

Comments:
BldD sigH-p3 transcription is comfirmed in sporulating aerial hyphae by GFP in wild-type S. coelicolor.
Kelemen GH, et al. (2001) described this promoter as sigH-p2.

Terminator

No Data

Overview

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Contact: Yuko Makita