DBSCR - Transcription factor

   Database of transcriptional regulation in Streptomyces coelicolor

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Transcription factor: HpdA

Gene ID SCO2928 (link to ScoCyc)
Factor type AsnC-family
Pfam PF01037 (AsnC family )
Consensus seq. ND
Comment None

Regulated Gene Sigma Regulation Absolute position Location Binding seq.(cis-element) Experimental evidence
hppD None Positive 3179771..3179890 -126:-7 ACCCGCACCCTCCCTGCTGGTCATCCTGTACAGATCGCCCGCCCGCACCCGCACGTCACTGGTCATGTTGCCCACTGAAAACGCAAACTATTGCGCACCTTGCGAACAGGGGAGAACCTG Yang H, et al. (2007): DB, GS, FT
hpdA None Negative 3179772..3179890 -60:+59 AGGTTCTCCCCTGTTCGCAAGGTGCGCAATAGTTTGCGTTTTCAGTGGGCAACATGACCAGTGACGTGCGGGTGCGGGCGGGCGATCTGTACAGGATGACCAGCAGGGAGGGTGCGGGT Yang H, et al. (2007): DB, GS, FT
hmgA None Positive ND ND ND Zhang Y, et al. (2008): DB




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Contact: Yuko Makita