DBSCR - Transcription factor

   Database of transcriptional regulation in Streptomyces coelicolor

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Transcription factor: SigE

Gene ID SCO3356 (link to ScoCyc)
Factor type ECF sigma factor
Pfam PF04542 (Sigma-70 region 2 ) PF08281 (Sigma-70, region 4 )
Consensus seq. ND
Comment None
Link to Weight matrix & Motif alignment

Regulated Gene Absolute position Location Binding seq.(cis-element) Experimental evidence
dagA 3832703..3832762 -50:+10 GCCACGTGGGCGTTCCGGAACTTTTTGCACGCACGCGAGCTCTCGAATTTTGGCGCCCAG Kang JG, et al. (1997): GS, RO
Buttner MJ, et al. (1988): RO
Fujii T, et al. (1996): RO
Paget MS, et al. (1999): S1, DB
Buttner MJ, et al. (1987): S1
Servin-Gonzalez L, et al. (1994): S1
Lonetto MA, et al. (1994): -
hrdD 3511740..3511799 -50:+10 GTGACTCCGCGTCCGTGGCAACCCTCAGGCGGTACGGGCCGTCTTCAGGGTGGGAGAGCA Buttner MJ, et al. (1990): S1
Kang JG, et al. (1997): GS, RO
Paget MS, et al. (1999): S1, DB
hrdD 3511488..3511547 -50:+10 AATCGAGGGGCAGGTTGGGAATTCTGTCCGGATTCCAGTCGTTGTTTCCATCGGATGCAG Paget MS, et al. (1999): S1, DB
whiB 3321239..3321298 -50:+10 CTTCGGCGCGTGTATCGGAACGGGATCGATCGCCGGGGCGTCCTTCCTGGTGCCGGTGCG Soliveri J, et al. (1992): S1
Kang JG, et al. (1997): GS, RO
Soliveri J, et al. (1992): S1, RO
cwgA 6783792..6783851 -50:+10 AAGGTCGCGAGCACACGCAACCTGGTCCCCGTTTTCGTCGTCTTCCTGGTCAGCGAAGGC Hong HJ, et al. (2002): S1, DB




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Contact: Yuko Makita