DBSCR - Regulated genes

   Database of transcriptional regulation in Streptomyces coelicolor
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Regulated gene: afsS

Operon: No data
Genes Gene ID Synonyms Direction Genome position Function
afsS SCO4425 SCD6.03c, afsR2, afsS - 4842382..4842573 sigma-like protein

Promoters

Binding
factor		 Promoter
name		 Regulation Location Absolute position Binding seq.(cis-element) Experimental evidence
HrdB - Promoter -50:+10 4842708..4842767 GTAGCCGGAGCGTTCAGCGTTCGTTTATCTCCCCCTGGCACTGTCATCTCCGTCAGACCG Lee PC, et al. (2002): S1
Tanaka A, et al. (2007): S1
AfsR - Positive -50:+10 4842709..4842768 GGTAGCCGGAGCGTTCAGCGTTCGTTTATCTCCCCCTGGCACTGTCATCTCCGTCAGACC Lee PC, et al. (2002): S1, GS, FT, DB
Umeyama T, et al. (2002): Review
Tanaka A, et al. (2007): S1, FT, SDM
PhoP - Negative -50:+10 4842708..4842767 GTAGCCGGAGCGTTCAGCGTTCGTTTATCTCCCCCTGGCACTGTCATCTCCGTCAGACCG Santos-Beneit F,et al. (2009): GS,FT

Comments:
PhoP PhoP downregulates afsS expression probably by a competition with the AfsR activator.

Terminator

No Data

Overview

DBSCR:

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Contact: Yuko Makita