DBSCR - Regulated genes

   Database of transcriptional regulation in Streptomyces coelicolor

Home
Transcription factors
Regulated genes
Revised TLS
Search
Contacts

Regulated gene: phoD

Operon: No data
Genes Gene ID Synonyms Direction Genome position Function
phoD SCO2068 SC4A10.01, SC4G6.37, phoD + 2218545..2220200 putative secreted alkaline phosphatase


Promoters

Binding
factor
Promoter
name
Regulation Location Absolute position Binding seq.(cis-element) Experimental evidence
HrdB - Promoter -50:+10 2218495..2218554 TTTGCGAGTTCGCCCACTCGCGCGCGTACCGATCAGTAACCTGATCGGCCGTGACCAGTC Apel AK, et al. (2007): PE
PhoP - Positive -94:+1 2218451..2218545 CGGTGGCCGGTTCCGGTGATCGCCGGCTGACGAGTGGGCGAACTTTTGCGAGTTCGCCCACTCGCGCGCGTACCGATCAGTAACCTGATCGGCCG Apel AK, et al. (2007): DB, GS, FT

Comments:
HrdB Leaderless mRNA. Expression of phoD is highly sensitive to phosphate availability.
PhoP The upstream direct repeats located in the complementary strand.


Terminator

No Data

Overview






DBSCR:

Copyright: BASE, RIKEN
Contact: Yuko Makita