DBSCR - Regulated genes

   Database of transcriptional regulation in Streptomyces coelicolor
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Regulated gene: SCO1196

Operon: No data
Genes Gene ID Synonyms Direction Genome position Function
SCO1196 SCO1196 SCG11A.27c - 1267630..1268493 putative secreted protein

Promoters

Binding
factor		 Promoter
name		 Regulation Location Absolute position Binding seq.(cis-element) Experimental evidence
PhoP - Positive -132:-83(from translation start site) 1268576..1268625 TCCGGTGAGGTGAACGACCGAAGTGAACGACCGGCGGCGGTCCGGCCAAC Sola-Landa A, et al. (2008): HM, DB, GS, FT

Comments:
PhoP Twenty promoters were amplified by PCR and analysed by EMSA. These promoters showing positive binding. SCO1196 (a putative secreted protein), SCO1394 (a possible glycosyl hydrolase), SCO1906 and SCO3790 (putative phosphatases different from phoA, phoC, phoD), SCO2262 (a possible oxidoreductase), SCO5447 (a putative neutral zinc metalloprotease), SCO6169 (a possible regulatory protein), encoding a heat-inducible transcriptional repressor, hrdA (SCO2465). In the SCO1196 protected region, a well-conserved DRu (Direct Repeat units) is 2-nt apart from three consecutive DRus.

Terminator

No Data

Overview

DBSCR:

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Contact: Yuko Makita