DBSCR - Transcription factor

   Database of transcriptional regulation in Streptomyces coelicolor and its closest relatives
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List of Regulated Genes

Link to S. griseus and other Streptomyces

a b c d e f g h i j k l m n o p q r s t u v w x y z S 2

 - a -
Gene Synonym Description # of transcription
factorss		 # of binding
sequences
ahpC SCO5032 alkyl hydroperoxide reductase
2
1
agl3R SCO7168 putative gntR-family transcriptional regulator
2
1
agl3E SCO7167 putative secreted sugar-binding protein
2
1
actII-ORF4 SCO5085 actinorhodin cluster activator protein
15
5
actI-orf1 SCO5087 actinorhodin polyketide beta-ketoacyl synthase alpha subunit
2
3
actIII SCO5086 ketoacyl reductase
4
4
afsS SCO4425 sigma-like protein
3
3
amtB SCO5583 ammonium transporter
4
3
absA1 SCO3225 two component sensor kinase
1
1
actVI-orfA SCO5071 hydroxylacyl-CoA dehydrogenase
2
2
actVI-orf1 SCO5072 hydroxylacyl-CoA dehydrogenase
2
2
amfC SCO4184 aerial mycelium formation
1
1
adpA SCO2792 araC-family transcriptional regulator
1
0
actVA5 SCO5080 putative hydrolase
1
0
abeB SCO3288 putative integral membrane protein
2
2
aceE1 SCO2183 putative pyruvate dehydrogenase E1 component
1
0
aceE2 SCO2371 pyruvate dehydrogenase E1 component
1
0
afsL SCO4377 putative serine-threonine protein kinase
1
1
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 - b -
Gene Synonym Description # of transcription
factorss		 # of binding
sequences
bldG SCO3549 putative anti-sigma factor antagonist
1
2
bldN SCO3323 putative RNA polymerase sigma factor
5
4
bdtA SCO3328 hypothetical protein
2
2
bldD SCO1489 putative DNA-binding protein
2
2
bldB SCO5723 putative regulator, BldB
2
1
bldM SCO4768 putative two-component regulator
2
2
bldC SCO4091 putative DNA-binding protein
1
1
bkdA2 SCO3831 E1-alpha branched-chain alpha keto acid dehydrogenase
1
0
bldA SCOt24 Leu tRNA
1
1
bldH SCO2792 araC-family transcriptional regulator
1
1
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 - c -
Gene Synonym Description # of transcription
factorss		 # of binding
sequences
catR SCO5206 hydrogen peroxide sensitive repressor
2
3
catA SCO0379 catalase (EC 1.11.1.6)
2
2
cinA SCO5754 conserved hypothetical protein SC7C7.09
1
1
catB SCO0666 catalase (EC 1.11.1.6).
1
1
catC SCO0560 catalase/peroxidase
2
2
crtE SCO0186 putative phytoene dehydrogenase (phytoene desaturase) (putative secreted protein)
1
1
crtY SCO0191 putative lycopene cyclase
1
1
cwgA SCO6179 putative nucleotide-sugar dehydratase
1
1
cdaR SCO3217 putative transcriptional regulator
3
0
clpB SCO3661 ATP-dependent protease ATP-binding subunit
2
2
chiB SCO5673 secreted chitinase
1
1
chiD SCO1429 chitinase (putative secreted protein)
1
1
chiF SCO7263 chitinase
1
1
cspA SCO3748 cold shock protein
1
1
chiC SCO5376 chitinase C (putative secreted protein)
1
1
crgA SCO3854 cputative membrane protein
1
1
cydA SCO3945 putative cytochrome oxidase subunit I
2
3
clpP1 SCO2619 ATP dependent Clp protease proteolytic subunit 1
1
1
cdgA SCO2817 conserved hypothetical protein
1
1
crr SCO1390 putative PTS system sugar phosphotransferase component IIA
1
1
ctc SCO3124 ribosomal L25p family protein
1
0
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 - d -
Gene Synonym Description # of transcription
factorss		 # of binding
sequences
dagA SCO3471 extracellular agarase precursor
4
4
dnaK SCO3671 heat shock protein 70
2
2
desA SCO2782 putative pyridoxal-dependent decarboxylase
2
2
dasA SCO5232 putative sugar transporter sugar binding protein
1
0
divIVA SCO2077 hypothetical protein
1
0
devA SCO4190 putative GntR-family transcriptional regulator
1
0
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 - e -
Gene Synonym Description # of transcription
factorss		 # of binding
sequences
eshA SCO7699 putative nucleotide-binding protein
1
1
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 - f -
Gene Synonym Description # of transcription
factorss		 # of binding
sequences
folE SCO3403 putative GTP cyclohydrolase I
1
1
furA SCO0561 Fe regulatory protein
1
1
ftsZ SCO2082 cell division protein
10
4
ftsI SCO2090 cell division protein
1
0
ftsY SCO5580 putative prokaryotic docking protein
1
0
fabD SCO2387 malonyl CoA:acyl carrier protein malonyltransferase
1
1
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 - g -
Gene Synonym Description # of transcription
factorss		 # of binding
sequences
glnR SCO4159 transcriptional regulatory protein
4
4
gylR SCO1658 glycerol operon regulatory protein
2
1
gylA SCO1659 putative glycerol uptake facilitator protein
2
2
guaB SCO4770 inosine 5' monophosphate dehydrogenase
1
1
gltB SCO2026 putative glutamate synthase large subunit
2
3
glkA SCO2126 glucokinase
1
1
galP1 SCO3138 galactose-1-phosphate uridylyltransferase
1
1
glcP1 SCO5578 putative sugar transporter
1
1
glnA SCO2198 glutamine synthetase I
4
3
glnII SCO2210 glutamine synthetase
6
5
glpQ1 SCO1565 putative glycerophosphoryl diester phosphodiesterase
1
1
glpQ2 SCO1968 putative secreted hydrolase
1
1
groES SCO4761 10 kD chaperonin cpn10
1
1
groEL2 SCO4296 chaperonin 2
1
1
gdhA SCO4683 NADP-specific glutamate dehydrogenase
1
1
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 - h -
Gene Synonym Description # of transcription
factorss		 # of binding
sequences
hrdB SCO5820 major vegetative sigma factor
1
1
hrdD SCO3202 RNA polymerase principal sigma factor
4
3
hflX SCO5796 conserved hypothetical protein SC4H2.17
1
1
hppD SCO2927 putative 4-hydroxyphenylpyruvate dioxygenase
3
3
hpdA SCO2928 putative asnC-family transcriptional regulator
3
3
hspR SCO3668 putative heat shock protein
1
1
hmgA SCO1715 putative homogentisate 1,2-dioxygenase
2
1
hpdR SCO2935 putative transcriptional regulator
1
1
hmaS SCO3229 putative 4-hydroxyphenylpyruvic acid dioxygenase
1
0
hrdA SCO2465 RNA polymerase principal sigma factor
1
1
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 - k -
Gene Synonym Description # of transcription
factorss		 # of binding
sequences
kasO SCO6280 putative regulatory protein
3
3
kbpA SCO4422 putative hydrolase
1
1
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 - l -
Gene Synonym Description # of transcription
factorss		 # of binding
sequences
litQ SCO0192 putative oxidoreductase
1
1
litR SCO0193 putative DNA-binding regulator
1
1
litS SCO0194 putative sigma factor
1
1
lipA SCO2194 putative lipoic acid synthetase
2
2
lon SCO5285 ATP-dependent protease
2
2
leuC SCO5553 3-isopropylmalate dehydratase large subunit
1
1
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 - m -
Gene Synonym Description # of transcription
factorss		 # of binding
sequences
mshA SCO4204 putative glycosyltransferase
2
1
mca SCO4967 conserved hypothetical protein
1
1
moeB SCO5178 putative sulfurylase
1
1
mshC SCO1663 putative cysteinyl-tRNA synthetase
1
0
macs1 SCO6195 putative acetyl-coenzyme A synthetase
2
2
malE SCO2231 putative maltose-binding protein
2
1
malR SCO2232 maltose operon transcriptional repressor
1
1
melC1 SCO2701 tyrosinase co-factor
1
0
malX2 SCO2905 hypothetical protein
1
1
metK SCO1476 S-adenosylmethionine synthetase
2
2
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 - n -
Gene Synonym Description # of transcription
factorss		 # of binding
sequences
nepA SCO4002 putative secreted protein
4
1
nikA SCO6451 putative substrate binding protein
1
1
nikM SCO3159 putative membrane protein
1
1
nusG SCO4647 transcription antitermination protein
1
1
nirB SCO2487 putative nitrite reductase large subunit NirB
1
1
nrdR SCO5804 conserved hypothetical protein SC4H2.25
2
3
nrdA SCO5226 ribonucleotide-diphosphate reductase large chain
2
2
nasA SCO2473 putative nitrate reductase
1
1
nagE2 SCO2907 putative PTS transmembrane component
2
3
nagB SCO5236 putative glucosamine phosphate isomerase
1
1
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 - o -
Gene Synonym Description # of transcription
factorss		 # of binding
sequences
ohrA SCO2986 conserved hypothetical protein SCE50.14c
2
2
ohrR SCO2987 putative regulatory protein
2
3
oxyR SCO5033 hydrogen peroxide sensing regulator
2
1
orfTH4 SCO2933 putative permease binding-protein component
1
1
orfTH270 SCO2552 conserved hypothetical protein SCC77.19c
1
1
osaB SCO5749 two-component regulator
1
1
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 - p -
Gene Synonym Description # of transcription
factorss		 # of binding
sequences
pepN SCO2643 aminopeptidase N
1
1
parA SCO3886 putative partitioning or sporulation protein
5
2
pstS SCO4142 phosphate-binding protein precursor
3
7
pep SCO4024 putative integral membrane efflux protein
1
1
ptr SCO2209 putative transcriptional regulator
1
0
phoA SCO2286 putative alkaline phosphatase
3
4
phoC SCO0828 putative alkaline phosphatase
1
2
phoD SCO2068 putative secreted alkaline phosphatase
2
2
phoU SCO4228 putative phosphate transport system regulator
2
3
phoR SCO4229 putative sensor kinase
3
3
pqrA SCO1568 putative tetR-family transcriptional regulator
2
1
parB SCO3887 putative partitioning or sporulation protein
1
0
pcaI SCO6703 putative 3-oxoadipate CoA-transferase subunit A
1
0
pepA2 SCO7337 hypothetical protein.
1
1
ptsH SCO5841 phosphocarrier protein hpr
1
2
pkaG SCO4487 serine/threonine protein kinase
1
1
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 - r -
Gene Synonym Description # of transcription
factorss		 # of binding
sequences
redD SCO5877 transcriptional regulator RedD
12
2
rpmB2 SCO3429 putative 50S ribosomal protein L28
2
2
rpmG2 SCO0570 50S ribosomal protein L33
2
2
rpmF2 SCO0436 probable 50S ribosomal protein
2
2
rpmG3 SCO4635 50S ribosomal protein L33
2
0
rpmE3 SCO5359 50S ribosomal protein L31
1
1
rbpA SCO1421 hypothetical protein SC6D7.18c.
1
1
relA SCO1513 GTP pyrophosphokinase
1
1
rsbV SCO7325 anti-sigma factor antagonist.
1
1
rrnD probable 5S rRNA
3
4
rrnE probable 16S rRNA
1
1
redZ SCO5881 response regulator
6
2
ramC SCO6681 putative serine/threonine protein kinase
2
2
ragA SCO4075 ABC transport protein, ATP-binding subunit
2
2
rex SCO3320 conserved hypothetical protein
2
2
rshA SCO5794 putative kinase/phosphohydrolase
1
1
rplK SCO4648 50S ribosomal protein L11
1
1
rrnA 16S rRNA
2
4
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 - s -
Gene Synonym Description # of transcription
factorss		 # of binding
sequences
sigN SCO4034 putative RNA polymerase sigma factor
5
2
sigR SCO5216 RNA polymerase sigma factor
3
2
ssrA ssrA gene coding for tmRNA
1
1
sigB SCO0600 RNA polymerase sigma factor sig8
1
1
sgaA SCO7339 conserved hypothetical protein SC4G10.18c.
1
1
ssgB SCO1541 putative regulator
1
1
sigE SCO3356 ECF sigma factor
2
1
scbA SCO6266 ScbA protein
3
3
scbR SCO6265 gamma-butyrolactone binding protein
3
3
sigF SCO4035 RNA polymerase sigma factor
2
1
sodF SCO2633 superoxide dismutase [Fe-Zn] (EC 1.15.1.1)
1
1
sodF2 SCO0999 superoxide dismutase
1
1
sodN SCO5254 superoxide dismutase
1
0
ssgA SCO3926 putative regulator
2
1
sigL SCO7278 putative RNA polymerase sigma factor
1
0
sigM SCO7314 probable RNA polymerase sigma factor
1
0
sigH SCO5243 RNA polymerase sigma factor
2
2
sigI SCO3068 putative RNA polymerase sigma factor
1
0
sigJ SCO1276 RNA polymerase ECF sigma factor
1
1
sapA SCO0409 spore-associated protein precursor
1
1
secE SCO4646 preprotein translocase SecE subunit
1
1
sigU SCO2954 putative RNA polymerase sigma factor
1
1
sti SCO0762 protease inhibitor precursor
3
4
sacA SCO5999 aconitase
1
1
scoT SCO6287 thioesterase II
1
1
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 - t -
Gene Synonym Description # of transcription
factorss		 # of binding
sequences
trxB SCO3890 thioredoxin reductase (NADPH)
2
2
trxC SCO0885 thioredoxin
2
2
tatA SCO1633 putative secreted protein
1
0
tuf3 SCO1321 elongation factor TU-3
1
1
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 - u -
Gene Synonym Description # of transcription
factorss		 # of binding
sequences
ushY SCO5245 conserved hypothetical protein
1
1
ushX SCO5244 anti-sigma factor
2
3
ureA SCO1236 urease gamma subunit
1
1
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 - v -
Gene Synonym Description # of transcription
factorss		 # of binding
sequences
vanR SCO3590 putative two-component system response regulator
2
1
vanJ SCO3592 putative membrane protein
2
1
vanK SCO3593 conserved hypothetical protein
2
1
vanH SCO3594 putative D-lactate dehydrogenase
2
1
vdh SCO4089 valine dehydrogenase (EC 1.4.1.-)
1
1
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 - w -
Gene Synonym Description # of transcription
factorss		 # of binding
sequences
whiB SCO3034 sporulation regulatory protein
2
2
whiG SCO5621 RNA polymerase sigma factor WhiG
2
3
whiH SCO5819 sporulation transcription factor, WhiH
3
1
wblE SCO5240 hypothetical protein
1
1
whiI SCO6029 two-component regulator
2
1
whiE-ORFI SCO5320 whiE protein I
8
1
whiD SCO4767 putative regulatory protein
1
2
whiE-ORFVIII SCO5321 polyketide hydroxylase
7
1
whiA SCO1950 hypothetical protein
2
1
wblA SCO3579 putative regulatory protein
2
0
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 - x -
Gene Synonym Description # of transcription
factorss		 # of binding
sequences
xdhA SCO1134 putative oxidoreductase, iron-sulphur binding subunit
2
1
xdhR SCO1135 putative tetR-family transcriptional regulator
2
1
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 - z -
Gene Synonym Description # of transcription
factorss		 # of binding
sequences
znuA SCO2505 putative ABC-transporter metal-binding lipoprotein
2
2
zur SCO2508 putative metal uptake regulation protein
1
1
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 - S -
Gene Synonym Description # of transcription
factorss		 # of binding
sequences
SC8E4A.04c SCO2634 conserved hypothetical protein SC8E4A.04c
1
1
SCE87.13 SCO3162 putative esterase
1
1
SC6G10.34c SCO2161 conserved hypothetical protein
1
1
SCE22.04 SCO3187 conserved hypothetical protein SCE22.04
1
1
SCE19A.11c SCO2911 conserved hypothetical protein
1
1
SC7H2.09c SCO1995 hypothetical protein
1
1
SC7H2.11c SCO1997 conserved hypothetical protein
1
1
SC3D11.22 SCO5465 conserved hypothetical protein
1
1
SCE20.23 SCO2849 conserved hypothetical protein SCE20.23.
1
1
SCM1.15 SCO0882 hypothetical protein SCM1.15.
1
1
SC6A5.08 SCO6759 putative phytoene synthase
1
1
SC4B5.01c SCO6551 putative oxidoreductase
1
1
SCE25.24c SCO3083 putative integral membrane protein
1
1
SCP8.26c SCO5163 hypothetical protein SCP8.26c
1
1
SCE9.22 SCO3415 putative esterase
1
1
SCO7277 putative regulator protein
1
1
SCO7289 putative regulator
1
1
SCO2372 putative small hydrophobic protein
1
1
SCO2127 hypothetical protein
1
1
SC1C2.36 SCO5555 hypothetical protein SC1C2.36
1
1
SCF12.02c SCO0323 hypothetical protein
1
0
SCF91.33c SCO0673 hypothetical protein SCF91.33c.
1
0
SCO2208 putative carboxylesterase
1
0
SCO7697 putative secreted hydrolase
1
1
SCO0034 hypothetical protein
1
1
SCO2878 hypothetical protein SCE6.15.
1
1
SCO4879 conserved hypothetical protein
1
1
SCO4878 putative glycosyltransferase
1
1
SCO4261 putative response regulator
1
1
SCO0255 putative sigma factor
1
1
SCO0888 putative secreted protein
1
1
SCO2400 putative membrane protein
1
1
SCO2404 putative sugar-binding receptor
1
1
SCO2195 hypothetical protein
1
1
SCO7155 hypothetical protein SC9A4.17
1
1
SCO1863 hypothetical protein SCI39.10c
1
1
SCO0732 putative secreted protease
1
1
SCO0752 protease precursor
1
1
SCO0930 putative lipoprotein
1
1
SCO1356 putative iron sulphur protein (putative secreted protein)
1
1
SCO2217 putative secreted protein
1
1
SCO6650 hypothetical protein SC4G2.24
1
1
SCO2408 putative aminotransferase
1
1
SC7A1.14 SCO5570 hypothetical protein
2
1
SCJ12.16c SCO0204 putative luxR family two-component response regulator
1
0
SC1G7.04 SCO6278 putative integral membrane transport protein
1
0
SC1G7.06 SCO6280 putative regulatory protein
1
0
SC1G7.10 SCO6284 putative decarboxylase
1
0
SCO7681 putative AMP-binding ligase
1
1
SCO7682 putative non-ribosomal peptide synthase
2
2
SCO7676 putative ferredoxin
1
1
SCO0475 ABC transporter protein, integral membrane subunit
1
1
SCO2478 putative reductase
1
1
SCO4266 putative oxidoreductase
1
1
SCO7008 putative ABC-transport protein.
1
1
SCO1909 hypothetical protein
1
1
SCO1178 hypothetical protein SCG11A.09c
1
1
SCO3201 putative tetR-family transcriptional regulator
1
1
SCO1906 putative secreted protein
1
1
SCO3790 conserved hypothetical protein
1
1
SCO1196 putative secreted protein
1
1
SCO1394 putative glycosyl hydrolase
1
1
SCO2262 putative oxidoreductase
1
1
SCO5447 putative neutral zinc metalloprotease
1
1
SCO6169 putative regulatory protein
1
1
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 - 2 -
Gene Synonym Description # of transcription
factorss		 # of binding
sequences
2SC3B6.11c SCO5187 putative glutaredoxin-like protein
1
1
2SC7G11.11 SCO5249 putative nucleotide-binding protein
1
0
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