DBSCR - Regulated genes

   Database of transcriptional regulation in Streptomyces coelicolor
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Regulated gene: SCO4878

Operons: SCO4877-SCO4878

Genes Gene ID Synonyms Direction Genome position Function
SCO4877 SCO4877 2SCK8.03c - 5308045..5309379 hypothetical protein 2SCK8.03c
SCO4878 SCO4878 2SCK8.04c - 5309376..5310356 putative glycosyltransferase

Operon evidence: RT-PCR
Reference: Charaniya S, et al. (2007)
Comments: Charaniya S, et al. confirmed the co-transcription of SCO4877 and SCO4878 by RT-PCR.

Promoters

Binding
factor		 Promoter
name		 Regulation Location Absolute position Binding seq.(cis-element) Experimental evidence
PhoP - Positive -87:-41(from translation start site) 5310397..5310443 CCGCTTCACCGCTTCGACACGCCTCGTTCACCGCGTGTCAAGGTTCA Rodr_guez-Garc_a A, et al. (2007): 2D-gel, DB, GS
Sola-Landa A, et al. (2008): HM, DB, GS, FT

Comments:
PhoP The promoter of SCO4878-SCO4879(putative glycosiltransferase; hypothetical protein, respectively), that have been shown to be recognized by PhoPDBD. The nucleotide sequences protected from DNase digestion by PhoPDBD are shown for each promoter in Figure S1 (Supplementary Data).

Terminator

No Data

Overview

DBSCR:

Copyright: BASE, RIKEN
Contact: Yuko Makita