DBSCR - Regulated genes

   Database of transcriptional regulation in Streptomyces coelicolor
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Regulated gene: cydA

Operons: cydABCD

Genes Gene ID Synonyms Direction Genome position Function
cydA SCO3945 SCD78.12, cydA + 4340932..4342437 putative cytochrome oxidase subunit I
cydB SCO3946 SCD78.13, cydB + 4342458..4343462 putative cytochrome oxidase subunit II
cydCD SCO3947 SCD78.14, cydCD + 4343538..4347056 putative ABC transporter

Reference: Brekasis D, et al. (2003)

Promoters

Binding
factor		 Promoter
name		 Regulation Location Absolute position Binding seq.(cis-element) Experimental evidence
Unknown_sigma cyd-p1 Promoter -50:+10 4340769..4340828 CACAGGGGACCCCCCTTCCGGTGTCGAAAAGCTGTAGGTCATAATTGCTTGTGAATGTGA Brekasis D, et al. (2003): S1
Unknown_sigma cyd-p2 Promoter -50:+10 4340637..4340696 AGCTGTAGCCCCGAACGGGGCGGGACGACGAGGCGCGGGACGGCAGGTGCCGTCCCGCGC Brekasis D, et al. (2003): S1
Rex cyd-p1 Negative +1:+26 4340819..4340844 GTGAATGTGAACGCGTTCACAAGCGT Brekasis D, et al. (2003): -

Comments:
Unknown_sigma cyd-p1 is strongly induce within 15 min of oxygen limitation, falling slightly below its maximal level over the next 45 min.
Unknown_sigma cyd-p2 is constitutively expressed

Terminator

No Data

Overview

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Contact: Yuko Makita