DBSCR - Regulated genes

   Database of transcriptional regulation in Streptomyces coelicolor
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Regulated gene: gylA

Operons: gylABX

Genes Gene ID Synonyms Direction Genome position Function
gylA SCO1659 SCI52.01, glpF, gylA + 1777840..1778634 putative glycerol uptake facilitator protein
gylB SCO1660 SCI52.02, glpK, gylB + 1778726..1780264 putative glycerol kinase
gylX SCO1661 SCI52.03, gylX + 1780273..1781889 putative glycerol-3-phosphate dehydrogenase

Operon evidence: Northern blot analysis (5.4 kb (gylABX), 4.3kb (gylAB), and ~2.9 kb; the precise size of the 2.9kb transcript is not clear because of overlapping with 23S rRNA)
Reference: Smith CP, et al. (1988)

Promoters

Binding
factor		 Promoter
name		 Regulation Location Absolute position Binding seq.(cis-element) Experimental evidence
Unknown_sigma gyl-p1 Promoter -50:+10 1777641..1777700 GATAACACAGCTCTTGACGCGCGCGTGACGTCGAACGAGACTCGCGTCCATCGGTCGGCA Smith CP, et al. (1988): S1
Smith CP, et al. (1988): S1
Hindle Z, et al. (1994): S1
Unknown_sigma gyl-p2 Promoter -50:+10 1777691..1777750 TCGGTCGGCATTGTCGAACACCTACCGGCAATACGCGTTAGAGTGTCCACAGTGCCAAGG Smith CP, et al. (1988): S1
Smith CP, et al. (1988): S1
Hindle Z, et al. (1994): S1
GylR - Negative ND ND ND Hindle Z, et al. (1994): S1, DB

Comments:
GylR Operon is renamed from gylABX to gylCABX. There is no gylC gene on NCBI files. First gene can be gylC?

Terminator

No Data

Overview

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Contact: Yuko Makita