DBSCR - Regulated genes

   Database of transcriptional regulation in Streptomyces coelicolor
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Regulated gene: hpdR

Operon: No data
Genes Gene ID Synonyms Direction Genome position Function
hpdR SCO2935 SCE19A.35c, hpdD, hpdR - 3186380..3187042 putative transcriptional regulator

Promoters

Binding
factor		 Promoter
name		 Regulation Location Absolute position Binding seq.(cis-element) Experimental evidence
HpdR - Negative -125:+34 3187218..3187377 CAAGGTCCAGGAGTGGGCGACGCGGATGAAGTGACACGCGGGGTACCGGTGCCGAGGGCGTGCGCGGTACGTACTGGGACAAACACAGGCGGTTGATAACGGTTGGCGCCCGGATTCTGGACGGAGCCTTCCGCTGAGCGAACCGGGTCCTTTACTGTCC Yang H, et al. (2010): DB, OV, GS, S1

Comments:
HpdR S1 mapping assay showed that the transcription of the hpdR promoter in hpdRDMJ-P was at nearly the same level as that of J1501 at24 h, but it remained at the same level from 24 h to 120 h,whereas the transcription of hpdR in J1501 decreased after48 h (Fig. 2). A 159 bp probe (2125 to +34 relative to the tsp), containing the 235, 210 and tsp regions of the hpdR promoter, was bound by HpdR and exhibited a similar profile (data not shown).

Terminator

No Data

Overview

DBSCR:

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Contact: Yuko Makita