DBSCR - Regulated genes

   Database of transcriptional regulation in Streptomyces coelicolor
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Regulated gene: hrdA

Operon: No data
Genes Gene ID Synonyms Direction Genome position Function
hrdA SCO2465 SC7A8.04c, hrdA - 2653137..2654327 RNA polymerase principal sigma factor

Promoters

Binding
factor		 Promoter
name		 Regulation Location Absolute position Binding seq.(cis-element) Experimental evidence
PhoP - Negative -112:-79(from translation start site) 2654406..2654439 GGTTTTCCGGGGGTAACCCCTCGGTCACGCCCCG Sola-Landa A, et al. (2008): HM, DB, GS, FT

Comments:
PhoP Twenty promoters were amplified by PCR and analysed by EMSA. These promoters showing positive binding. SCO1196 (a putative secreted protein), SCO1394 (a possible glycosyl hydrolase), SCO1906 and SCO3790 (putative phosphatases different from phoA, phoC, phoD), SCO2262 (a possible oxidoreductase), SCO5447 (a putative neutral zinc metalloprotease), SCO6169 (a possible regulatory protein), encoding a heat-inducible transcriptional repressor, hrdA (SCO2465).

Terminator

No Data

Overview

DBSCR:

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Contact: Yuko Makita