DBSCR - Regulated genes

   Database of transcriptional regulation in Streptomyces coelicolor
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Regulated gene: nrdA

Operons: nrdABS

Genes Gene ID Synonyms Direction Genome position Function
nrdA SCO5226 SC7E4.23c, nrdL, nrdA - 5685768..5688143 ribonucleotide-diphosphate reductase large chain
nrdB SCO5225 SC7E4.22c, nrdM, nrdB - 5684737..5685768 ribonucleotide-diphosphate reductase small chain
nrdS SCO5224 SC7E4.21c, nrdS - 5683497..5684465 putative araC-family transcriptional regulator

Operon evidence: 4.9 kb (Nothern blot)
Reference: Borovok I, et al. (2004)

Promoters

Binding
factor		 Promoter
name		 Regulation Location Absolute position Binding seq.(cis-element) Experimental evidence
NrdR - Negative -60:-1 5688406..5688465 GCGCCGGGACACAACATCTGGGGGTGCTCGCGTCCCCCGGCACAAGATGTATGCTCATGC Grinberg I, et al. (2006): GS, HM
Unknown_sigma - Promoter -50:+10 5688396..5688455 ACAACATCTGGGGGTGCTCGCGTCCCCCGGCACAAGATGTATGCTCATGCTCGCTGTCGC Borovok I, et al. (2004): DB, HB

Terminator

No Data

Overview

DBSCR:

Copyright: BASE, RIKEN
Contact: Yuko Makita