DBSCR - Regulated genes

   Database of transcriptional regulation in Streptomyces coelicolor
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Regulated gene: nrdR

Operons: nrdRJ

Genes Gene ID Synonyms Direction Genome position Function
nrdR SCO5804 SC4H2.25, nrdR + 6347027..6347575 conserved hypothetical protein SC4H2.25
nrdJ SCO5805
+ 6347744..6350647 ribonucleotide reductase

Operon evidence: 3.7 kb (Nothern blot)
Reference: Borovok I, et al. (2004)

Promoters

Binding
factor		 Promoter
name		 Regulation Location Absolute position Binding seq.(cis-element) Experimental evidence
NrdR - Negative -70:-30 6346892..6346931 TAGCGTGAGCAGCCCACAAGTTGTGGTCCCCCGGGTCTTC Borovok I, et al. (2004): DB, HB
Grinberg I, et al. (2006): GS, HM
NrdR - Negative -100:-60 6346862..6346901 ATGAGCCAATCCCCACATCTAGTGGTTGGATAGCGTGAGC Borovok I, et al. (2004): DB, HB
Grinberg I, et al. (2006): GS, HM
Unknown_sigma - Promoter -50:+10 6346911..6346970 GTTGTGGTCCCCCGGGTCTTCGAGCCCGTCGCGATCGCCTATGCTGGGGGCTGCTTCGAG Borovok I, et al. (2004):

Terminator

No Data

Overview

DBSCR:

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Contact: Yuko Makita