DBSCR - Regulated genes

   Database of transcriptional regulation in Streptomyces coelicolor
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Regulated gene: ushY

Operons: ushYX-sigH

Genes Gene ID Synonyms Direction Genome position Function
ushY SCO5245 2SC7G11.07c, ushY - 5705753..5706013 conserved hypothetical protein
ushX SCO5244 2SC7G11.06c, prs, prsH, ushX - 5705089..5705502 anti-sigma factor
sigH SCO5243 2SC7G11.05c, sig1, sig37, sig52, sigH - 5704007..5705092 RNA polymerase sigma factor

Operon evidence: transcriptional analylsis
Reference: Kormanec J, et al. (2000)

Promoters

Binding
factor		 Promoter
name		 Regulation Location Absolute position Binding seq.(cis-element) Experimental evidence
Unknown_sigma sigH-p1 Promoter -50:+10 5706007..5706066 CCCGCCCTCGTTTTCCGCGCGGTCGTCCGCACGCCCGTCGTAACCTGGCAATCATGAAAC Kormanec J, et al. (2000): S1
Sevcikova B, et al. (2001): S1

Comments:
Unknown_sigma SigH-P1 is a constitutive promoter, expressed weakly in the exponential phase (12h), increased at the end of exponential phase (20h) and decreased slightly n stationary phase (30h) (Kormanec J, et al. 2000).
ORF start from +4 bp from the transcription start stie. (no RBS)

Terminator

No Data

Overview

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Contact: Yuko Makita