DBSCR - Regulated genes

   Database of transcriptional regulation in Streptomyces coelicolor
Home
 Transcription factors
 Regulated genes
 Revised TLS
 Search
 Contacts

Regulated gene: vanH

Operons: vanHAX

Genes Gene ID Synonyms Direction Genome position Function
vanH SCO3594 SC66T3.05, dldh, vanH + 3971293..3972306 putative D-lactate dehydrogenase
vanA SCO3595 SC66T3.06, ddlA2, vanA + 3972317..3973357 putative D-alanine:D-lactate ligase
vanX SCO3596 SC66T3.07, vanX + 3973354..3973962 putative D-alanine:D-alanine dipeptidase

Operon evidence: Genome analysis (The stop and start codons are overlapping)
Reference: Hong HJ, et al. (2004)

Promoters

Binding
factor		 Promoter
name		 Regulation Location Absolute position Binding seq.(cis-element) Experimental evidence
Unknown_sigma - Promoter -50:+10 3971243..3971302 ATCGAAAAGCGCATACGGGACGGCAACACCGAGGCGCCTTGAATAGAGGCATGACCTTCT Hong HJ, et al. (2004): S1
VanR - Positive ND ND ND Hong HJ, et al. (2004): DB

Comments:
Unknown_sigma The transcription start site and the translation start site are the same position.

Terminator

No Data

Overview

DBSCR:

Copyright: BASE, RIKEN
Contact: Yuko Makita