DBSCR - Regulated genes

   Database of transcriptional regulation in Streptomyces coelicolor

Home
Transcription factors
Regulated genes
Revised TLS
Search
Contacts

Regulated gene: griJ

Operons: griJHI

Genes Gene ID Synonyms Direction Genome position Function
griJ SGR_4250
- 4970791..4972074 putative aspartokinase homologue
griH SGR_4248
- 4968644..4969834 3,4-AHBA synthase
griI SGR_4249
- 4969910..4970734 aldolase

Reference: Higashi T, et al. (2007)


Promoters

Binding
factor
Promoter
name
Regulation Location Absolute position Binding seq.(cis-element) Experimental evidence
GriR - Positive -74:+1 4972117..4972191 CCCGATACGCACGCAATAGCCCGCCGGTGCGACGGAGAGACGGCCCCGATATCCCCCTCCTGGAAGCTCGTCGCA Higashi T, et al. (2007): DB,GS,FT
Unknown_sigma - Promoter -50:+10 4972118..4972170 CGCCGGTGCGACGGAGAGACGGCCCCGATATCCCCCTCCTGGAAGCTCGTCGC Higashi T, et al. (2007): S1

Terminator

No Data

Overview






DBSCR:

Copyright: BASE, RIKEN
Contact: Yuko Makita