DBSCR - Regulated genes

   Database of transcriptional regulation in Streptomyces coelicolor
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Regulated gene: hrdB

Operons: hrdB

Genes Gene ID Synonyms Direction Genome position Function
hrdB SGR_1701
- 2005872..2007416 RNA polymerase principal sigma factor hrdB

Reference: Shinkawa H, et al. (1995)

Promoters

Binding
factor		 Promoter
name		 Regulation Location Absolute position Binding seq.(cis-element) Experimental evidence
Unknown_sigma - Promoter -50:+10 2007565..2007624 GCCACGCGGATTGGCCGTAACACTCCTCGAAGCAGCGCGATGACTTAAGAGGTGAGCGTC Shinkawa H, et al. (1995): PE

Terminator

Terminator sequence Absolute position Position from stop codon Free energy
[kcal/mol]		 Downstream of
AGATCCACCGGCCGAGGGCCCGGAACCCCGAGGGGATCCGGGCCCTCCGGCGTGTCCTCGGGGGCGG
          >>>>>>>>>>>>>>>>>>>  <<<<<<<<<<<<<<<<<<<<
2005814..2005854
18..58
-37.75
hrdB

Overview

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Contact: Yuko Makita