DBSCR - Transcription factor

   Database of transcriptional regulation in Streptomyces coelicolor

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Transcription factor: ActII-ORF4

Gene ID SCO5085 (link to ScoCyc)
Factor type ND
Pfam PF00486 (Transcriptional regulatory protein, C terminal )
Consensus seq. ND
Comment Positive regulator of actinorhodin biosynthetic genes.

Regulated Gene Sigma Regulation Absolute position Location Binding seq.(cis-element) Experimental evidence
actVI-orfA None Positive 5514253..5514352 -100:-1 GCCCGCCCCGATCACTGTCACGGTGCTCATGGCGACGAGCCTGGCAGCGCCCACTCGAACCCGGCTCGAGGGAACTTCGAGGCCACCGGGCGACCGTGGC Arias P, et al. (1999): GS, FT
actVI-orf1 None Positive 5514251..5514345 -70:+25 CGGCCACGGTCGCCCGGTGGCCTCGAAGTTCCCTCGAGCCGGGTTCGAGTGGGCGCTGCCAGGCTCGTCGCCATGAGCACCGTGACAGTGATCGG Arias P, et al. (1999): GS, FT
actIII None Positive 5529835..5529877 -126:-83 CCGTGGCTCGAAGGAGGCTCGAAGGCCGATACGGGACCCCTCG Arias P, et al. (1999): GS, FT
actI-orf1 None Positive 5529824..5529892 -70:+1 GGATCCGGCATCGAGGGGTCCCGTATCGGCCTTCGAGCCTCCTTCGAGCCACGGGGCCGACGATGACGA Arias P, et al. (1999): GS, FT




DBSCR:

Copyright: BASE, RIKEN
Contact: Yuko Makita