DBSCR - Transcription factor

   Database of transcriptional regulation in Streptomyces coelicolor

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Transcription factor: RamR

Gene ID SCO6685 (link to ScoCyc)
Factor type ND
Pfam PF00196 (Bacterial regulatory proteins, luxR family ) PF00072 (Response regulator receiver domain )
Consensus seq. ND
Comment Ortholog gene of AmfR in {i}S. griseus{/i}.
Orthologous link S. griseus

Regulated Gene Sigma Regulation Absolute position Location Binding seq.(cis-element) Experimental evidence
ramC None Positive 7419570..7419700 -145:-15 CCGCCCCGGCAACAGCCCTTCCGCCACGCGGAATTCTCCCGCTCCGGGAGTCCCGCCGCCGCGAAGTTACTTGTGCGTTCCGCACCTCGGAGTGGTGACAGCCGCAACTGTCCGAGGCGGTACGCCGCGTG O'Connor TJ, et al. (2002): OV, GS, DB
Chater KF, et al. (2003): Review
Nguyen KT, et al. (2002): GS,RG
ragA None Positive 4469766..4469828 -80:-18 GGTGCCCGGCGGCTCTGACATTTGTCATGTCCGGTGATGACGGCTCGCACTGTCGTCCCGCCC San Paolo S, et al. (2006): OV, GS, FT, DB




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Contact: Yuko Makita