DBSCR - Transcription factor

   Database of transcriptional regulation in Streptomyces coelicolor
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Transcription factor: SigU

Gene ID SCO2954 (link to ScoCyc)
Factor type ECF sigma factor
Pfam None
Consensus seq. TGA(A/G)C(A/G)N16-17CGTA
Comment None

Regulated Gene Absolute position Location Binding seq.(cis-element) Experimental evidence
SCO0732 774656..774711 None GCCGGCCCGGTGAACACCGAGGTTCCCGCCGCCGTATGGGAGGAGGGTGCTCGACG Gordon ND, et al. (2008): FP, HM
SCO0752 796058..796113 None AGGGCCCGGCTGAACACCCCGCCCGGTCCGTGCGTACCAACAGCCGTCCAGGCGCC Gordon ND, et al. (2008): FP, 2D-gel, HM
SCO0930 978488..978544 None CGCGACCGGTTGAACACAACGGGCTGCCCCGTGCGTACCCAGTGTCGTGCGGCGGCC Gordon ND, et al. (2008): FP, 2D-gel, HM
SCO1356 1434137..1434192 None CCGCCGGCCTTGAACAACAAGCGCCGCGGGGCCGTACCTCTCGGCAGATCATCACG Gordon ND, et al. (2008): FP, HM
SCO2217 2380373..2380428 None GCACGTCGGGTGAACACCTCTGGAGCGGCTTCCGTATGGATGGGAGCCGCTTCACT Gordon ND, et al. (2008): FP, 2D-gel, HM
sigU 3212764..3212819 None CATCTCGTTTTGAACACGCCGCACTTCGCGTCCGTACCGAATGGGCGAGCGACCGA Gordon ND, et al. (2008): FP, HM
SCO6650 7385561..7385616 None TACGGATCACTGAACAGGGGAAGGCATCCAGCCGTAATAGACGGCACCCGCGCAGC Gordon ND, et al. (2008): FP,2D-gel, HM
SCO2408 2580992..2581047 None TCACACCCGTTGAACGGTGCCCCGTCCACCTCCGTATACAGGGGCGGCCCGTGTCC Gordon ND, et al. (2008): FP, HM



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Contact: Yuko Makita