DBSCR - Regulated genes

   Database of transcriptional regulation in Streptomyces coelicolor
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Regulated gene: crr

Operons: crr-ptsI

Genes Gene ID Synonyms Direction Genome position Function
crr SCO1390 SC1A8A.10, crr + 1474291..1474740 putative PTS system sugar phosphotransferase component IIA
ptsI SCO1391 SC1A8A.11, ptsI + 1474827..1476497 phosphoenolpyruvate-protein phosphotransferase

Reference: Rigali S, et al. (2008)
Comments: intracellular general PTS proteins EI(ptsI) and EIIA(crr)

Promoters

Binding
factor		 Promoter
name		 Regulation Location Absolute position Binding seq.(cis-element) Experimental evidence
DasR - Negative -140:-105(from translation start site) 1474151..1474186 CCGTGAGGAGTGTGGTCTAGACCTCTAATCGGAACA Rigali S, et al. (2008): HM, GS, FT
Rigali S, et al. (2004): HM, GS
Rigali S, et al. (2006): GS, DB(by sqRT-PCR)

Comments:
DasR The protected sequence (TGTGGTCTAGACCTCT) corresponded to positions -130 to -115 relative to the start of crr, and had a 13- out of 16-bp match to the in silico-predicted consensus DasR-binding site.

Terminator

No Data

Overview

DBSCR:

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Contact: Yuko Makita