DBSCR - Regulated genes

   Database of transcriptional regulation in Streptomyces coelicolor
Home
 Transcription factors
 Regulated genes
 Revised TLS
 Search
 Contacts

Regulated gene: nikA

Operons: nikABCDE

Genes Gene ID Synonyms Direction Genome position Function
nikA SCO6451 SC9B5.18, nikA + 7135277..7136905 putative substrate binding protein
nikB SCO6452 SC9B5.19, nikB + 7136902..7137906 putative transport permease protein
nikC SCO6453 SC9B5.20, nikC + 7137903..7138841 putative transport permease protein
nikD SCO6454 SC9B5.21, nicD, nikD + 7138838..7139845 putative ABC transporter ATP-binding protein
nikE SCO6455 SC9B5.22, nikE + 7139838..7140506 putative ABC transporter ATP-binding protein

Operon evidence: Genome comparison with E. coli
Reference: Ahn BE, et al. (2006)

Promoters

Binding
factor		 Promoter
name		 Regulation Location Absolute position Binding seq.(cis-element) Experimental evidence
Nur - Negative -65:+3(translation start site) 7135212..7135279 TGGCTTGACGCTTTATTGCGAGTGATGTGCAATAGCTGCGCATCGACAACAAGCGTGGGGGAGACATG Ahn BE, et al. (2006): GS, S1, DB
An YJ, et al. (2009): FT

Comments:
Nur Nur negatively regultes a putative nickel-transporter gene cluster (nikABCDE) in the presence of nickel.

Terminator

No Data

Overview

DBSCR:

Copyright: BASE, RIKEN
Contact: Yuko Makita