DBSCR - Regulated genes

   Database of transcriptional regulation in Streptomyces coelicolor

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Regulated gene: ptsH

Operon: No data
Genes Gene ID Synonyms Direction Genome position Function
ptsH SCO5841
- 6394045..6394326 phosphocarrier protein hpr


Promoters

Binding
factor
Promoter
name
Regulation Location Absolute position Binding seq.(cis-element) Experimental evidence
DasR - Negative ND(upstream region of ptsH) 6394361..6394376 ACTGGTCTAGACAACT Rigali S, et al. (2008): HM, GS
Rigali S, et al. (2004): HM, GS
Rigali S, et al. (2006): DB(by Western blot)
DasR - Negative ND(upstream region of ptsH) 6394376..6394391 ACTGGTCTAGACAAGA Rigali S, et al. (2008): HM, GS
Rigali S, et al. (2004): HM, GS
Rigali S, et al. (2006): DB(by Western blot)

Comments:
DasR To build the matrices specific for PTSNag, we chose the cis-elements upstream crr-ptsI, between malX2 and nagE1, upstream nagE2, and upstream ptsH as training set of sequences.
DasR To build the matrices specific for PTSNag, we chose the cis-elements upstream crr-ptsI, between malX2 and nagE1, upstream nagE2, and upstream ptsH as training set of sequences.


Terminator

No Data

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Contact: Yuko Makita