DBSCR - Regulated genes

   Database of transcriptional regulation in Streptomyces coelicolor
Home
 Transcription factors
 Regulated genes
 Revised TLS
 Search
 Contacts

Regulated gene: ptsH

Operon: No data
Genes Gene ID Synonyms Direction Genome position Function
ptsH SCO5841
- 6394045..6394326 phosphocarrier protein hpr

Promoters

Binding
factor		 Promoter
name		 Regulation Location Absolute position Binding seq.(cis-element) Experimental evidence
DasR - Negative ND(upstream region of ptsH) 6394361..6394376 ACTGGTCTAGACAACT Rigali S, et al. (2008): HM, GS
Rigali S, et al. (2004): HM, GS
Rigali S, et al. (2006): DB(by Western blot)
DasR - Negative ND(upstream region of ptsH) 6394376..6394391 ACTGGTCTAGACAAGA Rigali S, et al. (2008): HM, GS
Rigali S, et al. (2004): HM, GS
Rigali S, et al. (2006): DB(by Western blot)

Comments:
DasR To build the matrices specific for PTSNag, we chose the cis-elements upstream crr-ptsI, between malX2 and nagE1, upstream nagE2, and upstream ptsH as training set of sequences.
DasR To build the matrices specific for PTSNag, we chose the cis-elements upstream crr-ptsI, between malX2 and nagE1, upstream nagE2, and upstream ptsH as training set of sequences.

Terminator

No Data

Overview

DBSCR:

Copyright: BASE, RIKEN
Contact: Yuko Makita