DBSCR - Regulated genes

   Database of transcriptional regulation in Streptomyces coelicolor
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Regulated gene: rrnD

Operon: No data
Genes Gene ID Synonyms Direction Genome position Function
rrnD rrnD
- 3296634..3296750 probable 5S rRNA

Promoters

Binding
factor		 Promoter
name		 Regulation Location Absolute position Binding seq.(cis-element) Experimental evidence
Unknown_sigma rrnD-p1 Promoter -50:+10 3302272..3302331 AACAGCCGCCTGATGTGCATCCACCCCTGGCGAGCTGCTAGTGTCCTCTTCGTTCCCGCA Baylis HA, et al. (1988): S1, in vitro transcription assay
Hahn MY, et al. (2007): S1, in vitro transcription assay
HrdB rrnD-p2 Promoter -50:+10 3302221..3302280 GTTCCCGCAAGAGCCGTTGACACGGAGCGAGCGGGGAGGTAGATTCGAACAGTTGCCTGG Baylis HA, et al. (1988): S1, in vitro transcription assay
Kang JG, et al. (1997): GS, RO
Hahn MY, et al. (2007): S1, in vitro transcription assay
Unknown_sigma rrnD-p3 Promoter -50:+10 3302075..3302134 GGAAACGAAGGCCGGTAAGACCGGCTCGAAAGTTCTGATAAAGTCGGAGCCGCCGGAAAG Baylis HA, et al. (1988): S1, in vitro transcription assay
Hahn MY, et al. (2007): S1, in vitro transcription assay
Unknown_sigma rrnD-p4 Promoter -50:+10 3301995..3302054 CTGGAAAGCGCCGAGGAAATCGGATCGGAAAGATCTGATAGAGTCGGAAACGCAAGACCG Baylis HA, et al. (1988): S1, in vitro transcription assay
Hahn MY, et al. (2007): S1, in vitro transcription assay
RbpA rrnD-p3 Positive ND ND ND Newell KV, et al. (2006): -

Comments:
RbpA Expression of rrnD-p3 is strongly inhibited by rifampicin. RbpA stimulates transcription from rrnD-p3 even in the presence of rifampicin.

Terminator

No Data

Overview

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Contact: Yuko Makita