DBSCR - Regulated genes

   Database of transcriptional regulation in Streptomyces coelicolor
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Regulated gene: whiE-ORFVIII

Operon: No data
Genes Gene ID Synonyms Direction Genome position Function
whiE-ORFVIII SCO5321 SC6G9.12c, whiE-ORFVIII + 5791641..5793524 polyketide hydroxylase

Promoters

Binding
factor		 Promoter
name		 Regulation Location Absolute position Binding seq.(cis-element) Experimental evidence
SigF whiE-p2 Promoter -50:+10 5791439..5791497 TGAAGCCTGCGCCGTGGCGGGCCCCGACGGGCCGTACGGGGCATGCATGAGAGGCCCCGG Kelemen GH, et al. (1998): PE
WhiA whiE-p2 Positive ND ND ND Kelemen GH, et al. (1998): DB (S1 protection)
WhiB whiE-p2 Positive ND ND ND Kelemen GH, et al. (1998): DB (S1 protection)
WhiG whiE-p2 Positive ND ND ND Kelemen GH, et al. (1998): DB (S1 protection)
WhiI whiE-p2 Positive ND ND ND Kelemen GH, et al. (1998): DB (S1 protection)
WhiH whiE-p2 Positive ND ND ND Kelemen GH, et al. (1998): DB (S1 protection)
WhiJ whiE-p2 Positive ND ND ND Kelemen GH, et al. (1998): DB (S1 protection)

Comments:
SigF SigF-containing holoenzyme is not sufficient to direct transcription of whiE-p2 in vitro.
NCBI file does not have G base of the transcription start site.
WhiH WhiE-p2 is strongly, but not absolutely dependent on WhiH.
WhiJ WhiE-p2 is strongly, but not absolutely dependent on WhiJ.

Terminator

No Data

Overview

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Contact: Yuko Makita