DBSCR - Regulated genes
Database of transcriptional regulation in
Streptomyces coelicolor
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Transcription factors
Regulated genes
Revised TLS
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Regulated gene:
xdhR
Operons: xdhR
Genes
Gene ID
Synonyms
Direction
Genome position
Function
xdhR
SCO1135
2SCG38.28, xdhR
+
1193398..1193988
putative tetR-family transcriptional regulator
Operon evidence:
Genome analysis: upstream and downstream genes are on the opposite strand.
Reference:
Promoters
Binding
factor
Promoter
name
Regulation
Location
Absolute position
Binding seq.(cis-element)
Experimental evidence
XdhR
-
Negative
ND
ND
ND
Hillerich B, et al. (2008)
: DB(RT-PCR), GS
HrdB?
-
Promoter
-50:+10
1193329..1193388
GGAAAACGTAACGGACAG
TTGTCC
GCTTAGCAAGGTCGG
GATTCG
GCCAC
GA
ACCCGAAA
Hillerich B, et al. (2008)
: PE
Terminator
No Data
Overview
DBSCR:
Copyright: BASE, RIKEN
Contact:
Yuko Makita