DBSCR - Regulated genes

   Database of transcriptional regulation in Streptomyces coelicolor
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Regulated gene: amfR

Operons: amfR SGR_2391-SGR_2392-amfR

Genes Gene ID Synonyms Direction Genome position Function
amfR SGR_2393
+ 2822113..2822718 transcriptional regulator
SGR_2391 SGR_2391
+ 2819856..2820875 putative acetyltransferase
SGR_2392 SGR_2392
+ 2820885..2821832 conserved hypothetical protein
amfR SGR_2393
+ 2822113..2822718 transcriptional regulator

Operon evidence: S1 promoter analysis for amfR, downstream gene is on the opposite strand Northern blot analysis (3.5 kb)
Reference: Yamazaki H, et al. (2003), Ueda K, et al. (1998)

Promoters

Binding
factor		 Promoter
name		 Regulation Location Absolute position Binding seq.(cis-element) Experimental evidence
AdpA amfR-site1 Positive +227:+175 2821821..2821873 CTGCTGAACTGAACCGGCCGTCCTGCGGGATCGCGGCCGGAATCCACCCCGTC Yamazaki H, et al. (2003): GS, FT
Yamazaki H, et al. (2004): FT
AdpA amfR-site2 Positive +72:+41 2821978..2822007 ACGGGAGCGGTATTCGGCCCGTTTGTCGGC Yamazaki H, et al. (2003): GS, FT
Yamazaki H, et al. (2004): FT
Unknown_sigma amfR-p1 Promoter -50:+10 2821998..2822057 GTTTGTCGGCGTACGCGAATGTCCATGCGCTCAACTGGATACCCGTCACCGGATGCGTAC Yamazaki H, et al. (2003): S1
Unknown_sigma amfR-p2 Promoter -50:+10 2821988..2822047 TATTCGGCCCGTTTGTCGGCGTACGCGAATGTCCATGCGCTCAACTGGATACCCGTCACC Yamazaki H, et al. (2003): S1

Terminator

No Data

Overview

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Contact: Yuko Makita