DBSCR - Transcription factor

   Database of transcriptional regulation in Streptomyces griseus
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Transcription factor: AdpA

Gene ID SGR_4742 (link to Genome Viewer)
Factor type AraC, FtrA
Pfam None
Consensus seq. 5'-TGGSCNGWWYNN-3'
Comment AdpA is a central transcriptional regulator in the A-factor regulatory cascade.
Orthologous link S. coelicolor Other Streptomyces

Regulated Gene Sigma Regulation Absolute position Location Binding seq.(cis-element) Experimental evidence
strR None Positive 6939566..6939620 -72:-19 CGAGGTCGCTTTTCGGTCATGCGGACAGCTTTACTTGGCCGTTGCCCGGATGTCC Ohnishi Y, et al. (1999): S1, DB
Yamazaki H, et al. (2000): GS
Tomono A, et al. (2005): GS,DB,FT
strR None Positive 6939348..6939389 -291:-250 TTATCGAAGAGAATCAGCCGCCGTGGCGCGATCCTGTGCATC Ohnishi Y, et al. (1999): S1, DB
Yamazaki H, et al. (2000): GS
Tomono A, et al. (2005): GS,DB,FT
sgiA None Positive 634624..634673 -100:-51 GAGCTGCCCGAATGACCATTCGGTCGGCTCGAACGCCCGCCCGCGGCTGG Hirano S, et al. (2006): GS, DB
ssgA None Positive 4276515..4276556 -257:-216 CTCAGTGCGAGATCGCGCCACACTTCTGGAACGGCTGCGCAA Yamazaki H, et al. (2003): DB, FT
Yamazaki H, et al. (2004): FT
ssgA None Positive 4276397..4276426 -128:-98 ATTGCGGCGATGGCCATTTCCGTACCCCTG Yamazaki H, et al. (2003): DB, FT
Yamazaki H, et al. (2004): FT
ssgA None Positive 4276214..4276267 +33:+86 CGATGGCGTCAATAGGGCCATGGGGGATCATTCCTGGCCAGATTCATCTACTGC Yamazaki H, et al. (2003): DB, FT
Yamazaki H, et al. (2004): FT
amfR None Positive 2821821..2821873 +227:+175 CTGCTGAACTGAACCGGCCGTCCTGCGGGATCGCGGCCGGAATCCACCCCGTC Yamazaki H, et al. (2003): GS, FT
Yamazaki H, et al. (2004): FT
amfR None Positive 2821978..2822007 +72:+41 ACGGGAGCGGTATTCGGCCCGTTTGTCGGC Yamazaki H, et al. (2003): GS, FT
Yamazaki H, et al. (2004): FT
adsA None Positive 4856755..4856810 -3:+53 AGACGCATCACGGAACCCGCCACTCGCTACCACGAGTGACGCTTTTCGAACTGCTC Yamazaki H, et al. (2000): GS, DB, FT
Yamazaki H, et al. (2004): FT
sgmA None Positive 2482219..2482252 -75:-40 CAACGAACGAAAACCGGCCAAGTTGTTGACGCGC Kato JY, et al. (2002): GS, DB, FT
sgmA None Positive 2482026..2482055 -244:-214 CCGGCGTGCGAATCTGGCCAGAACCCGACG Kato JY, et al. (2002): GS, DB, FT
sprA None Positive 404673..404702 -60:-30 TCCGGGCTCGCGGGCGCGAATCCGGCCTTG Tomono A, et al. (2005): DB, S1, FT
sprA None Positive 404320..404349 -410:-380 CGGAAGCACGTATTCAGCCAGCCCGAAAAG Tomono A, et al. (2005): DB, S1, FT
sprB None Positive 6749531..6749561 -65:-35 GTGACCCGCGTGGCCGAAAGGCATTCTTGCG Tomono A, et al. (2005): DB, S1, FT
sprD None Positive 6762830..6762859 -52:-22 CACGTCTGGAAGTCGACCTTGTGTGCGTTT Tomono A, et al. (2005): DB, S1, FT
sprD None Positive 6762689..6762718 -194:-164 GGATCCGCGCCGTCGAATACCGGACAGGAC Tomono A, et al. (2005): DB, S1, FT
sprT None Positive 1465579..1465608 -63:-33 CGTACGAGCTTGGCCGAAATGTGCGCCTTG Kato JY, et al. (2005): DB, GS, FT
sprU None Positive 6467108..6467137 -62:-33 CCGATGATCTTGGCCGAAAAGTGCACCTTG Kato JY, et al. (2005): DB, GS, FT
SGR_1350 None Positive 1582271..1582300 -106:-76 CGTCCAGCCAGGGCGGGTTACCGCCACGGC Akanuma G, et al. (2009): DB, GS, HM
SGR_1503 None Positive 1759528..1759557 -78:-49 CTATTTCCGCATTCCGGCCGATTCGCCGAG Akanuma G, et al. (2009): DB, GS, HM
SGR_1542 None Positive 1759528..1759557 -78:-49 CTATTTCCGCATTCCGGCCGATTCGCCGAG Akanuma G, et al. (2009): DB, GS, HM
SGR_2418 None Positive 2855798..2855827 -105:-76 GGGATCGCTTTGTCCGGATTTCGGGCACGC Akanuma G, et al. (2009): DB, GS, HM
melC1-2 None Positive 2884526..2884555 -276:-217 GGAGGGAGGAGTTCCAGCCAGCCGCAGATG Akanuma G, et al. (2009): DB, GS, HM
SGR_2648 None Positive 3128299..3128329 -77:-48 GAAGGGCCGTTTTGCGACAACCATGAGCTCA Akanuma G, et al. (2009): DB, GS, HM
SGR_3532 None Positive 4131104..4131133 -93:-64 TCACCGATCGAATCCGGCCACATCTGTTCA Akanuma G, et al. (2009): DB, GS, HM
SGR_3840 None Positive 4499112..4499141 -120:-91 CGTGCCGGGGCTTCCCGCCCGGCTCCGGCG Akanuma G, et al. (2009): DB, GS, HM
SGR_3840 None Positive 4499173..4499202 -181:-152 TCGGGGCCCATGGCCGAAAAGTGAGCAGGG Akanuma G, et al. (2009): DB, GS, HM
SGR_5809 None Positive 6804377..6804406 -63:-34 AGAACGGCTATGTCCGGTTTCCGCTCTTGA Akanuma G, et al. (2009): DB, GS, HM
SGR_5973 None Positive 6986281..6986310 -72:-43 GTTGACGTGTGTTTCCGCCATGTTGGCCGA Akanuma G, et al. (2009): DB, GS, HM
SGR_6809 None Positive 8190938..8190967 -67:-38 GGGGGTCAAGAGGCTGGATACCGACCAGAC Akanuma G, et al. (2009): DB, GS, HM
adpA None Negative 5574183..5574241 -139:-80 GCGCCCGGCGTGACCGGATACAGCACACGCAACCAATGGTTTTAAGCCAACTTCACCCG Kato JY, et al. (2005): DB, FT, DP
adpA None Negative 5574143..5574171 -68:-40 CTTCGCGGGATGGCCGGACACCCCACCGC Kato JY, et al. (2005): DB, FT, DP
adpA None Negative 5574120..5574147 -44:-15 ACCGCCCACCAGGCAGGAACGGACCGCG Kato JY, et al. (2005): DB, FT, DP
adpA None Negative 5574079..5574105 +1:+27 CCGACGCGGACGGGCCACGTTGTCGAA Kato JY, et al. (2005): DB, FT, DP
adpA None Negative 5574011..5574040 +66:+95 TGATCGAACGCTTCACGCCACGTTTCCTTA Kato JY, et al. (2005): DB, FT, DP
SGR_452 None Positive ND ND ND Hara H,et al. (2009): AR,GS
SGR_2079 None Positive ND ND ND Hara H,et al. (2009): AR,GS
SGR_2446 None Positive ND ND ND Hara H,et al. (2009): AR,GS
SGR_5931 None Positive ND ND ND Hara H,et al. (2009): AR,GS
SGR_299 None Positive ND ND ND Hara H,et al. (2009): AR,GS
wblA None Positive ND ND ND Hara H,et al. (2009): AR,GS
orf1590 None Positive ND ND ND Hara H,et al. (2009): AR,GS
SGR_2185 None Positive ND ND ND Hara H,et al. (2009): AR,GS
SGR_3226 None Positive ND ND ND Hara H,et al. (2009): AR,GS
SGR_4070 None Positive ND ND ND Hara H,et al. (2009): AR,GS
SGR_6126 None Positive ND ND ND Hara H,et al. (2009): AR,GS
SGR_6383 None Positive ND ND ND Hara H,et al. (2009): AR,GS
SGR_6385 None Positive ND ND ND Hara H,et al. (2009): AR,GS
SGR_710 None Positive ND ND ND Hara H,et al. (2009): AR,GS
SGR_2648 None Positive ND ND ND Hara H,et al. (2009): AR,GS
SGR_4958 None Positive ND ND ND Hara H,et al. (2009): AR,GS
SGR_6191 None Positive ND ND ND Hara H,et al. (2009): AR,GS
SGR_6809 None Positive ND ND ND Hara H,et al. (2009): AR,GS
SGR_447 None Positive ND ND ND Hara H,et al. (2009): AR,GS
SGR_5523 None Positive ND ND ND Hara H,et al. (2009): AR,GS
SGR_598 None Positive ND ND ND Hara H,et al. (2009): AR,GS
SGR_917 None Positive ND ND ND Hara H,et al. (2009): AR,GS
SGR_2066 None Positive ND ND ND Hara H,et al. (2009): AR,GS
SGR_3399 None Positive ND ND ND Hara H,et al. (2009): AR,GS
SGR_6365 None Positive ND ND ND Hara H,et al. (2009): AR,GS
SGR_6559 None Positive ND ND ND Hara H,et al. (2009): AR,GS
SGR_36t None Positive ND ND ND Hara H,et al. (2009): AR,GS
SGR_296 None Positive ND ND ND Hara H,et al. (2009): AR,GS
SGR_1002 None Positive ND ND ND Hara H,et al. (2009): AR,GS
SGR_2148 None Positive ND ND ND Hara H,et al. (2009): AR,GS
SGR_2456 None Positive ND ND ND Hara H,et al. (2009): AR,GS
SGR_2532 None Positive ND ND ND Hara H,et al. (2009): AR,GS
SGR_3575 None Positive ND ND ND Hara H,et al. (2009): AR,GS
SGR_3840 None Positive ND ND ND Hara H,et al. (2009): AR,GS
SGR_6153 None Positive ND ND ND Hara H,et al. (2009): AR,GS
SGR_6856 None Positive ND ND ND Hara H,et al. (2009): AR,GS
SGR_7011 None Positive ND ND ND Hara H,et al. (2009): AR,GS



DBSCR:

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Contact: Yuko Makita