DBSCR - Regulated genes
Database of transcriptional regulation in
Streptomyces coelicolor
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Transcription factors
Regulated genes
Revised TLS
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Regulated gene:
sgmA
Operons: sgmA
Genes
Gene ID
Synonyms
Direction
Genome position
Function
sgmA
SGR_2095
+
2482366..2484411
metalloendopeptidase griselysin
Operon evidence:
S1 promoter analysis for sgmA, downstream gene is on the opposite strand
Reference:
Kato JY, et al. (2002)
Promoters
Binding
factor
Promoter
name
Regulation
Location
Absolute position
Binding seq.(cis-element)
Experimental evidence
AdpA
sgmA-siteA
Positive
-75:-40
2482219..2482252
CAACGAACGA
AAACCGGCCA
AGTTGTTGACGCGC
Kato JY, et al. (2002)
: GS, DB, FT
AdpA
sgmA-siteB
Positive
-244:-214
2482026..2482055
CCGGCGTGCG
AATCTGGCCA
GAACCCGACG
Kato JY, et al. (2002)
: GS, DB, FT
Unknown_sigma
-
Promoter
-50:+10
2482242..2482301
TGTTGACGCGCTC
CTGACA
GGTGCGGTCATCTGCT
GACACT
CTTCACCCC
G
TTCTGCGCA
Kato JY, et al. (2002)
: S1
Terminator
No Data
Overview
DBSCR:
Copyright: BASE, RIKEN
Contact:
Yuko Makita