DBSCR - Regulated genes

   Database of transcriptional regulation in Streptomyces coelicolor
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Regulated gene: strB1

Operons: strB1FGHIKST

Genes Gene ID Synonyms Direction Genome position Function
strB1 SGR_5933
+ 6942395..6943441 scyllo-inosamine-4-phosphate amidinotransferase
strF SGR_5934
+ 6943485..6944330 StrF protein
strG SGR_5935
+ 6944340..6944939 StrG protein
strH SGR_5936
+ 6945101..6946255 putative dTDP-dihydrostreptose--streptidine-6- phosphate dihydrostreptosyltransferase
strI SGR_5937
+ 6946300..6947346 putative NAD:myo-inositol oxidoreductase
strK SGR_5938
+ 6947343..6948692 putative streptomycin-6-phosphate phosphatase
strS SGR_5939
+ 6948805..6949941 putative N-methyl-L-glucosamine biosynthetic aminotransferase
strT SGR_5940
+ 6950048..6951001 putative oxidoreductase

Operon evidence: Northern blot analysis ( kb)
Reference:

Promoters

Binding
factor		 Promoter
name		 Regulation Location Absolute position Binding seq.(cis-element) Experimental evidence
Unknown_sigma strB-P Promoter -50:+10 6942045..6942104 CGCCGCGGTGGACATATGCCCGAGCGAAGCGGCGCTGCTAGCCTGCGATGAGTACGGGAG Distler J, et al. (1987): S1
StrR - Positive -125:-60 6941970..6942035 CGCCGCACCTCCGATGCGTTCGACTGCCGATCACACGCAGTCGAACGCATCCGGCGTCCGCCGGCG Tomono A, et al. (2005): DB
Retzlaff L, et al. (1995): FT,GS

Comments:
StrR This gene does not express in the strR-disrupted strain. (Direct or indirect regulation is not clear.)

Terminator

No Data

Overview

DBSCR:

Copyright: BASE, RIKEN
Contact: Yuko Makita