DBSCR - Regulated genes

   Database of transcriptional regulation in Streptomyces coelicolor

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Regulated gene: sanO

Operons: sanOPQRSTUV

Genes Gene ID Synonyms Function
sanO
sanP
sanQ
sanR
sanS
sanT
sanU
sanV

Reference: Wang G, et al. (2003)


Promoters

Binding
factor
Promoter
name
Regulation Location Binding seq.(cis-element) Experimental evidence Organism
Unknown_sigma - Promoter -50:+10 GCGGGCGGGGCAAGCGAGGCGGCGAGGTCCTTGCAGGGACGCGGCGACATGCTGTGCGGGC Liu G, et al. (2005): DB
He X, et al. (2010): GS, FT, SDM
Wang G, et al. (2003): PE
S. ansochromogenes
SanG - Positive -46:-8 GCGGGGCAAGCGAGGCGGCGAGGTCCTTGCAGGGACGCG Liu G, et al. (2005): DB
He X, et al. (2010): GS, FT, SDM
Wang G, et al. (2003): PE
S. ansochromogenes

Comments:
Unknown_sigma A DNase I footprinting assay was used to analyse the interaction of SanG with the bidirectional sanN?sanO promoter region. On the sense strand, SanG protected two regions stretching from positions -9 to -46 and from -63 to -93 bases relative to the transcription start point of sanO. Analysis of the SanG-binding region revealed two direct repeats 5'-CGGCAAG-3' that overlap with the -35 regions of the sanN promoter P1 and sanO promoter, respectively. This is a typical feature of SARP-binding targets.
SanG A DNase I footprinting assay was used to analyse the interaction of SanG with the bidirectional sanN-sanO promoter region. On the sense strand, SanG protected two regions stretching from positions -9 to -46 and from -63 to -93 bases relative to the transcription start point of sanO. Analysis of the SanG-binding region revealed two direct repeats 5'-CGGCAAG-3' that overlap with the -35 regions of the sanN promoter P1 and sanO promoter, respectively. This is a typical feature of SARP-binding targets.


Terminator

No Data




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Contact: Yuko Makita