DBSCR - Transcription factor

   Database of transcriptional regulation in Streptomyces coelicolor
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Transcription factor: BldD

Gene ID SCO1489 (link to ScoCyc)
Factor type ND
Pfam PF01381 (Helix-turn-helix )
Consensus seq. AGTgA-Nx-TCACc
Comment Regulator for aerial hyphae formation. Non-essential global regulator.
Orthologous link S. griseus
Link to Weight matrix & Motif alignment

Regulated Gene Sigma Regulation Absolute position Location Binding seq.(cis-element) Experimental evidence
sigN None Promoter ND ND ND Dalton KA, et al. (2007): DB (S1 protection)
nepA None Promoter ND ND ND Dalton KA, et al. (2007): DB (S1 protection)
whiG None Negative 6120816..6120845 -130:-100 TGAGGTATTCGAGTGATCACCCAGAGCGAT Elliot MA, et al. (2001): FT, DB, S1
whiG None Negative 6120916..6120955 -30:+10 GCGACAGTCCAGTCACGCTACGCTCACGATGACCCCCACG Elliot MA, et al. (2001): FT, DB, S1
bldN None Negative 3675057..3675106 -40:+10 CTGGGCGTAGCAGTGCCTGCACGAAGCGTTATTCTCCTCAGACGCATTCC Elliot MA, et al. (2001): FT, DB, S1
bldN None Negative 3675122..3675161 +25:+65 CTACGACGGGTGAATGGTTCCGTACTGCACGTGATGGAAG Elliot MA, et al. (2001): FT, DB, S1
bdtA None Negative 3680301..3680350 -10:+40 ATTGGGGAGTGAGCACGCAGCGACGAAGAGTCACCGGAAGGGGAAGCCGG Elliot MA, et al. (2001): FT, DB, S1
bldD None Negative 1592286..1592325 -30:+10 CGCAGCAGAGTAACGCTGCGTAACCTCACAGTGAGTTACC Elliot MA, et al. (1999): GS, FT
Elliot MA, et al. (2003): DB
sigH None Negative 5705620..5705674 -40:+15 ACCCCCTAGCCACTGTGCGTGTTCGCGTGTTTACTATGAGTGACAGCACGGGGTT Kelemen GH, et al. (2001): S1, DB, FT
pepA2 None Negative 8150974..8151013 -90:-50(from translation start site) AAGCGATCAGCGCTCACGCTTCGTGATCGGGGAGCCCGTC den Hengst CD, et al. (2010): AR, CH, FT, HM
cdgA None Negative 3077524..3077563 -106:-66(from translation start site) GCCTCGAAGACACTCACGGAACGTCACAACTGGTCGGAGG den Hengst CD, et al. (2010): AR, CH, FT, HM
ftsZ None Negative 2235838..2235877 -257:-217(from translation start site) GGCAGCGCTACGGCTGATCACATAGGGTGAAAAGAAAAAC den Hengst CD, et al. (2010): AR, CH, FT, HM
bldA None Negative 3380847..3380902 +75:+130(from translation start site) GCTCCGGGCACCACTACTGTCACGCTGCGTGACCATCGGTGAAGGTTCCACGGGGC den Hengst CD, et al. (2010): AR, CH, FT, HM
sti None Negative 806707..806762 -100:-45(from translation start site) TGTGACTTCACGCCACTGATTCAATACGCAAGGTTACCGAAACCCGTGGGGTCGAG den Hengst CD, et al. (2010): AR, CH, FT, HM
bldH None Negative 3046904..3046959 -175:-120(from translation start site) CTTCCCAGGGGCGCCCGGGAGTGCAACGCTTCGTGATCGACTGCTTCACGCCAAGT den Hengst CD, et al. (2010): AR, CH, FT, HM



DBSCR:

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Contact: Yuko Makita