DBSCR - Regulated genes

   Database of transcriptional regulation in Streptomyces coelicolor
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Regulated gene: bldD

Operons: bldD

Genes Gene ID Synonyms Direction Genome position Function
bldD SCO1489 SC9C5.13, bldD + 1592381..1592884 putative DNA-binding protein

Operon evidence: Northern blot analysis (0.6-0.75 kb)
Reference: Elliot M, et al. (1998)

Promoters

Binding
factor		 Promoter
name		 Regulation Location Absolute position Binding seq.(cis-element) Experimental evidence
BldD - Negative -30:+10 1592286..1592325 CGCAGCAGAGTAACGCTGCGTAACCTCACAGTGAGTTACC Elliot MA, et al. (1999): GS, FT
Elliot MA, et al. (2003): DB
HrdB? - Promoter -50:+10 1592266..1592325 GTGCGGACCATTCGGCTTGACGCAGCAGAGTAACGCTGCGTAACCTCACAGTGAGTTACC Elliot M, et al. (1998): S1, HM
Elliot MA, et al. (1999): -

Terminator

Terminator sequence Absolute position Position from stop codon Free energy
[kcal/mol]		 Downstream of
GCAGAAACGTGCCGCCGGGGTGGCCGGAACCGTTCGTACGGTCCCGGCCACCCCGGCGGCTTTTACCCGTCGTAG
          >>>>>>>>>>>>>>>>>>>>>>>    <<<<<<<<<<<<<<<<<<<<<<<
1592910..1592959
26..75
-57.6 kcal
bldD

Overview

DBSCR:

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Contact: Yuko Makita