DBSCR - Transcription factor

Database of transcriptional regulation in Streptomyces coelicolor

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Gene ID	SCO3202 (link to ScoCyc)
Factor type	Sigma70
Pfam	PF00140 ( Sigma-70 factor, region 1.2 ) PF04539 (Sigma-70 region 3 ) PF04542 (Sigma-70 region 2 ) PF04545 (Sigma-70, region 4 )
Consensus seq.	tTGAcN-N17to18-tatNaT
Comment	None
Link to	Weight matrix & Motif alignment

Regulated Gene	Absolute position	Location	Binding seq.(cis-element)	Experimental evidence
redD	`6432548..6432607`	`-50:+10`	`AATCCGATCGTTCGGTGGATGACGGGTGGGGGAGTGCTTGCCACGATGGACCCGGTTCGA`	Fujii T, et al. (1996): RO Kang JG, et al. (1997): GS, RO
actII-ORF4	`5528013..5528072`	`-50:+10`	`TGACGGCAAGCACATTGAAATCTGTTGAGTAGGCCTGTTATTGTCGCCCCCAGGAGACGG`	Fujii T, et al. (1996): RO Kang JG, et al. (1997): GS, RO
whiB	`3321075..3321134`	`-50:+10`	`ATAGCAGATCTCGGCTTGACTCGCCCGGAGCAGCACACTTGTAATTTCACTCGTGTCGTT`	Soliveri J, et al. (1992): S1 Kang JG, et al. (1997): GS, RO Soliveri J, et al. (1992): S1, RO