DBSCR - Transcription factor

   Database of transcriptional regulation in Streptomyces coelicolor
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Transcription factor: SCO5405

Gene ID SCO5405 (link to ScoCyc)
Factor type MarR-family
Pfam None
Consensus seq. ND
Comment SCO5405 belongs to the MarR-family of transcriptional regulators involved in intrinsic resistance systems to vari- ous antibiotics and shows high similarities to both MmcW from Streptomyces lavendulae (score: 284, E-value: 7e-25, and 43% identities in amino acids 1?151) and PecS from Erwinia chrysanthemi (score 131; E-value 4e-07; 28.7% identity in amino acids 24?155).

Regulated Gene Sigma Regulation Absolute position Location Binding seq.(cis-element) Experimental evidence
actII-ORF4 None ND ND ND ND Park SS, et al. (2009): DACA(DNA-affinity capture assay; mass spectrometry), GS, DB
redD None ND ND ND ND Park SS, et al. (2009): DACA(DNA-affinity capture assay; mass spectrometry), GS, DB



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Copyright: BASE, RIKEN
Contact: Yuko Makita