DBSCR - Regulated genes

   Database of transcriptional regulation in Streptomyces coelicolor

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Regulated gene: dagA

Operon: No data
Genes Gene ID Synonyms Direction Genome position Function
dagA SCO3471 SCE65.07c, dagA - 3831705..3832634 extracellular agarase precursor


Promoters

Binding
factor
Promoter
name
Regulation Location Absolute position Binding seq.(cis-element) Experimental evidence
HrdB dagA-P4 Promoter -50:+10 3832843..3832902 GCAGCCGTACCGATTGTCACCCTGCGACACTCCGCTGTAGCATTCGGGAAACCGGTTCAC Kang JG, et al. (1997): GS, RO
Buttner MJ, et al. (1988): RO
Fujii T, et al. (1996): RO
Buttner MJ, et al. (1987): S1
Servin-Gonzalez L, et al. (1994): S1
Brown KL, et al. (1992): RO, SDS-PAGE
SigH dagA-P3 Promoter -50:+10 3832749..3832808 ACTTACCTCCTGGAGCCTAGCTCCTCCTGCGCCGTGGAATGATCGTGCCACGTGGGCGTT Kang JG, et al. (1997): GS, RO
Buttner MJ, et al. (1988): RO
Fujii T, et al. (1996): RO
Buttner MJ, et al. (1987): S1
Servin-Gonzalez L, et al. (1994): S1
Viollier PH, et al. (2003): Western blots (Immunodetection of SigH isoforms)
SigE dagA-P2 Promoter -50:+10 3832703..3832762 GCCACGTGGGCGTTCCGGAACTTTTTGCACGCACGCGAGCTCTCGAATTTTGGCGCCCAG Kang JG, et al. (1997): GS, RO
Buttner MJ, et al. (1988): RO
Fujii T, et al. (1996): RO
Paget MS, et al. (1999): S1, DB
Buttner MJ, et al. (1987): S1
Servin-Gonzalez L, et al. (1994): S1
Lonetto MA, et al. (1994): -
Unknown_sigma dagA-P1 Promoter -50:+10 3832657..3832716 ATTTTGGCGCCCAGGGTCTGCGGAAGTCATTGCCAAATATAAGATTCTTCAGCCAGGCGG Buttner MJ, et al. (1988): RO
Buttner MJ, et al. (1987): S1
Servin-Gonzalez L, et al. (1994): S1

Comments:
SigH sigH is expressed as three primary translation products, SigH-sigma(37), SigH-sigma(51), and SigH-sigma(52).
SigE dagA-p2 is recognized by sigE in vitro but its activitiy is unaffected in sigE null mutant.
Unknown_sigma All four promoters are induced by the products of agar hydrolysis and strongly repressed by glucose.


Terminator

No Data

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Contact: Yuko Makita